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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868857.1_cds_XP_016433585.1_29726
CDS Infomation

[gene=LOC107760079] [db_xref=GeneID:107760079] [protein=gamma-tubulin complex component 4 homolog isoform X2] [protein_id=XP_016433585.1] [location=join(44601..44776,45617..45908,46517..46653,47705..47803,48222..48339,49687..49956,50129..50209,50279..50362,52136..52222,52649..52704,52779..52973,53239..53464,54068..54156,54950..55010)] [gbkey=CDS]
Sequence

ATGCTGCACGAAATCTTAGTGGCGCTGTTGGGTTACACCGGAGATCTCATCATCGACGCA
AGACAACACCGAGATGATTCTACCCACAGTATTCCCTTGTCCCCAGATGCACCCATCTCT
CAGGAACCCACCTTTAAGCTTGCCCCTGATCTCTCCTTCGTTCAACCCAGTGAAAGGGAT
GTCATTGAGAGGATTATCACTCTAGGATTTTACTATAGGGAGCTAGAGCGCTTTGCAGCC
AAGTCTTGTAACTTAAGTTGGATTAGGTCCGCCAATGAGTCACCTCTGTCGAGGACATCC
CAACTATTGAAAGGGAAGACAGTGAAGCAAAGTGTGTACAGGAGGGCCATTGCGAATGGT
ATTGTTGAGGTGTTATCAGTTTATAGGTCTGCTGTTCTACATATTGAGCAAAAGTTACTG
TCTGATTCACCACCTATCTTGGCAACACTTACTCAAGGCCTCAATAAGTTCTTTGTTCTT
TTGCCTCCTCTTTTTGAGCTGATTCTAGAGATTGAACATGATAACATTTATGGAGGAAAA
CTTCTCAACCTTTTACACAAATGCTGCCACTGTGGGGTTCCGGAACTACAGACATGCATT
CAGAGGCTCCTCTGGCATGGGCATCAGGTCATGTATAATCAGCTTGCTTCTTGGGTGGTA
TATGGAATTCTTCATGATCCATATCAAGAATTCTACATCAGCAGTCAGGACGACAAAGAC
TCTGAACAGGAATCAGCTCCACATTTGCTTGAGAAACTGACACGCTTGTCAGTCGCTGAT
ACATCTTTAAGTGATTGGCACTTGGGCTTCCATATTTCTTTGGATATGCTGCCAGAGTAT
ATTACCATGCATGTTGCAGAATCAATTCTTTTTGCAGGAAAAGCTGTTAGGGTTCTTCGC
AATCCAAGTCCCAGTTTTCAATTGAAGGATGGTTCATCTCATCAGCAAATACAAAGAGGA
CCTCAAAGGGCCCAAGGATATACAACGGCGATATCTTTCCAGAATAACTCCTTGGATAAT
AAGTTAATTGGAGAAGATTTACTCCCACAGGCAGAGGCTGACAAGATTGAATCTCTGATT
CAACACTTAAAGGAGTCGTCTGAATTTCACAAAAGATCATTCGAGAATGCCATTGATACA
ATAAAAGCAGTTGCAGCCAGTCATCTGTGGCAGCTTGTCGTTGTGCGTGCCGACTTAAAT
GGGCACTTGAAGGCTCTTAAAGACTATTTTCTTTTAGAAAAAGGTGATTTCTTCCAGAGT
TTCCTCGAGGAGAGTCGCCAGCTGATGCGTTTACCACCTCGCCAATCTACTGCAGAAGCG
GATCTTATGGTCCCATTTCAACTAGCTGCTTTAAAGACTATTGGTGAAGAGGACAAATAC
TTTTCAAGGGTGTCTTTGCGGATGCCATCATTTGGAATTGCTTTAAAACCCTCACCAGTT
GATCTGCCCAAGGTAAAAGTGAATAAAGATGGAGACTCAGTAGGGCACCCAGATGCATCT
TTGGAGGTGTCCCTTGATGGATGGGATGGCATTTCCCTTGAATATTCTATTAACTGGCCA
TTGCAGCTGTTTGTTACGCCGGAAGTGCTATCCAAGTATCAAAGGATATTCCAGTATCTT
CTCCGTCTTAAGAGGACGCAAATGGAGTTGGAAAAATCATGGGCTTTTGCTATGCATCAA
GATCATTTTGACTTTGCTAAACTTCGAAATGACTCTAGAAAGTCATTTGTGTCTCAGCAT
CGAAGGCAACGCCTTAGACCAATGTGGCATGTTAGAGAGCACATGGCCTTCTTGATCAGA
AATCTTCAATTCTATATTCAGGTGGATGTGATAGAATCTCAATGGAACGTTTTGCAATCT
CATATTCAGAATTCTCATGATTTCACAGAACTTGTGGGCTTCCATCAAGATTCTGTTGGA
AGATCGAAAGCGACGAAAGCAATAGAAGTACTAAGGAGCTGGAGCACATAG

Peptide Sequence

PEP ID

XP_016433585.1
PEP Infomation

PREDICTED: gamma-tubulin complex component 4 homolog isoform X2 [Nicotiana tabacum]
Sequence

MLHEILVALLGYTGDLIIDARQHRDDSTHSIPLSPDAPISQEPTFKLAPDLSFVQPSERD
VIERIITLGFYYRELERFAAKSCNLSWIRSANESPLSRTSQLLKGKTVKQSVYRRAIANG
IVEVLSVYRSAVLHIEQKLLSDSPPILATLTQGLNKFFVLLPPLFELILEIEHDNIYGGK
LLNLLHKCCHCGVPELQTCIQRLLWHGHQVMYNQLASWVVYGILHDPYQEFYISSQDDKD
SEQESAPHLLEKLTRLSVADTSLSDWHLGFHISLDMLPEYITMHVAESILFAGKAVRVLR
NPSPSFQLKDGSSHQQIQRGPQRAQGYTTAISFQNNSLDNKLIGEDLLPQAEADKIESLI
QHLKESSEFHKRSFENAIDTIKAVAASHLWQLVVVRADLNGHLKALKDYFLLEKGDFFQS
FLEESRQLMRLPPRQSTAEADLMVPFQLAALKTIGEEDKYFSRVSLRMPSFGIALKPSPV
DLPKVKVNKDGDSVGHPDASLEVSLDGWDGISLEYSINWPLQLFVTPEVLSKYQRIFQYL
LRLKRTQMELEKSWAFAMHQDHFDFAKLRNDSRKSFVSQHRRQRLRPMWHVREHMAFLIR
NLQFYIQVDVIESQWNVLQSHIQNSHDFTELVGFHQDSVGRSKATKAIEVLRSWST

Transcript Sequence

Gene sequence data has not been registered.